Program blastp blastx
Database H. vulgare G1, S, G2 proteins H. vulgare G1 proteins H. vulgare S proteins H. vulgare G2 proteins
Enter sequence below in FASTA format Or load it from disk
Set subsequence: From To
The query sequence is not filtered for low complexity regions by default. Filter Low complexity Mask for lookup table only
Expect 1E-100 1E-10 1E-4 1 10
Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
Other advanced options:
Alignment view Pairwise master-slave with identities master-slave without identities flat master-slave with identities flat master-slave without identities BLAST XML Hit Table
Descriptions 0 10 50 100 250 500
Alignments 0 10 50 100 250 500
Color schema No color schema Color schema 1 Color schema 2 Color schema 3 Color schema 4 Color schema 5 Color schema 6
